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Our experimental research group explores the physical properties of natural and artificial biomolecular systems and their applications in bionanotechnology.
Biomolecular nanodevices

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DNA and RNA molecules can fold into a variety of different structures and shapes. For instance, complementary DNA molecules can bind with each other to form double-stranded molecules; self-complementary sequences can fold back to form hairpin loops, etc. It is possible to design molecular structures which can be reversibly switched between several alternative structures, some of which may have a particular function. Such switchable structures can find use as mechanical actuators, motors, sensors and even computational elements.
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Biochemical circuits

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Biochemical processes such as DNA hybridization, enzymatic catalysis, or gene transcription can be exploited to implement biomolecular analogues of electronic logic circuits and signal processing. For instance, the production or release of certain biomolecules can be made dependent on the evaluation of "diagnostic" computational rules. The realization of artificial biochemical circuits holds great promise for the development of advanced biosensors, but also for re-programming of biological systems ("synthetic biology").
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DNA self-assembly
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The unique biophysical and biochemical properties of DNA molecules can be utilized for the construction and assembly of artificial biomolecular nanostructures. Due to the intimate linkage between DNA sequence and structure, DNA is ideally suited as a material for "programmable" self-assembly. Recently, the field has been revolutionized by the introduction of the "DNA origami" technique which allows for the realization of almost arbitrary two-dimensional and three-dimensional shapes. Our group currently explores its use in the context of biophysics and bionanotechnology |
Nanopores

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Nanometer-sized channels in lipid bilayer membranes can be used as single molecule detectors for the translocation of biological molecules. When a voltage is applied across a pore-containing bilayer membrane, an open pore current in the pico-ampere range is measured. Molecules that are drawn electrophoretically through the pore cause a reduction of this ionic current. Statistical analysis of the current blockades for a large number of translocation events allows for a single molecule characterization of the translocating species and its characterization. Within our lab, this increasingly popular technique is currently used for the characterization of unconventional DNA and RNA structures. |
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